DRX300415
Illumina HiSeq 2500 sequencing of SAMD00393842

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
JADE3

Cell type

Cell type Class
Kidney
Cell type
293
Primary Tissue
Kidney
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

sample_name
A20_21T0226-PHF16_conc
antibody
PHF16
biomaterial_provider
Michael L. Cleary
cell_line
HEK293T
cell_type
Embryonic

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
32138983
Reads aligned (%)
96.5
Duplicates removed (%)
23.3
Number of peaks
18094 (qval < 1E-05)

hg19

Number of total reads
32138983
Reads aligned (%)
96.0
Duplicates removed (%)
24.2
Number of peaks
18120 (qval < 1E-05)

Base call quality data from DBCLS SRA